We used Pash to anchor WGS reads from the Rhesus macaque (Macaca mulatta) trace archive to the Hg16 build of the Human genome. Selected Human RefSeq genes and 20Kb flanking regions were used to drive our Comparative Sequence Assembly of the corresponding Rhesus sequence and scaffolding of the resulting contigs.
Also available for these gene regions are our Pash anchorings of reads from the Chimp (Pan troglodytes) trace archive. These anchorings used the Hg15 draft of the Human genome.
We provide several means of accessing the data:
Direct Access By RefGene Name or Accession Number
If we have assembly-related data for your RefGene, it will be shown and you can download what interests you.
Access Via Genboree
By entering a keyword, you will browse that area of the Human genome within the Comparative Assembly Genboree project. The data for an assembled region is available through the pop-ups for the "CSA:Mml.gene" track.
Download Data for an Entire Chromosome
We also provide tar-gzipped data sets by chromosome.
Read Anchorings for Chimp
Read Anchorings (to Hg15)